The 2.0 version of rSNPBase

Variant report

Variant rs13393509
Chromosome Location chr2:144383404-144383405
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:144377600-144394400 Weak transcription Spleen Spleen
2 chr2:144378800-144387600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr2:144379400-144389200 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr2:144379600-144387200 Strong transcription Primary T cells from cord blood blood
5 chr2:144379800-144414000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:144380000-144386000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
7 chr2:144380000-144386200 Strong transcription Primary T cells fromperipheralblood blood
8 chr2:144380000-144387400 Strong transcription Primary B cells from cord blood blood
9 chr2:144380400-144385800 Strong transcription Primary T helper naive cells fromperipheralblood blood
10 chr2:144380400-144386600 Strong transcription Primary B cells from peripheral blood blood
11 chr2:144380400-144387400 Strong transcription Dnd41 blood
12 chr2:144380400-144394000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr2:144380600-144383600 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr2:144380600-144384200 Strong transcription Primary T helper naive cells from peripheral blood blood
15 chr2:144380600-144386000 Strong transcription Primary T helper cells PMA-I stimulated --
16 chr2:144380800-144383600 Strong transcription Primary hematopoietic stem cells blood
17 chr2:144380800-144386000 Strong transcription Primary monocytes fromperipheralblood blood
18 chr2:144380800-144386000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr2:144381000-144386400 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr2:144381000-144386400 Strong transcription Primary T regulatory cells fromperipheralblood blood
21 chr2:144381200-144383800 Strong transcription Primary T killer naive cells fromperipheralblood blood
22 chr2:144381200-144384600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr2:144381200-144385800 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr2:144381200-144386200 Strong transcription Fetal Thymus thymus
25 chr2:144381200-144386400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr2:144381200-144386600 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr2:144381200-144387800 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr2:144381400-144384600 Strong transcription Thymus Thymus
29 chr2:144381400-144386600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr2:144381400-144386800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:144381600-144384200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr2:144382400-144383600 Enhancers Fetal Stomach stomach
33 chr2:144383000-144384200 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr2:144383400-144383800 ZNF genes & repeats GM12878-XiMat blood
35 chr2:144383400-144385600 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015