The 2.0 version of rSNPBase

Variant report

Variant rs13398794
Chromosome Location chr2:187384571-187384572
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187357600-187386200 Strong transcription Dnd41 blood
2 chr2:187358600-187385800 Weak transcription Esophagus oesophagus
3 chr2:187359600-187386400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:187359800-187387200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr2:187360000-187386800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr2:187361200-187385600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:187361400-187389200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:187363000-187385600 Weak transcription Aorta Aorta
9 chr2:187363000-187387800 Weak transcription Pancreas Pancrea
10 chr2:187363000-187408800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr2:187363200-187397600 Weak transcription Small Intestine intestine
12 chr2:187367200-187385600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:187367200-187396800 Weak transcription Gastric stomach
14 chr2:187367200-187405800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:187370800-187385600 Weak transcription Fetal Stomach stomach
16 chr2:187370800-187385600 Weak transcription Spleen Spleen
17 chr2:187370800-187385800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:187370800-187385800 Weak transcription Lung lung
19 chr2:187370800-187386800 Weak transcription Stomach Mucosa stomach
20 chr2:187371000-187385800 Weak transcription Thymus Thymus
21 chr2:187371000-187389400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr2:187371000-187395800 Weak transcription Fetal Heart heart
23 chr2:187371000-187407800 Weak transcription Placenta Amnion Placenta Amnion
24 chr2:187371400-187385600 Weak transcription Ovary ovary
25 chr2:187372200-187390000 Weak transcription Fetal Brain Male brain
26 chr2:187373600-187385600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:187373600-187385600 Weak transcription Fetal Muscle Leg muscle
28 chr2:187373600-187388000 Weak transcription Psoas Muscle Psoas
29 chr2:187373600-187395800 Weak transcription HSMMtube muscle
30 chr2:187373600-187397600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr2:187373800-187385800 Weak transcription Brain Cingulate Gyrus brain
32 chr2:187373800-187385800 Weak transcription Left Ventricle heart
33 chr2:187373800-187386000 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr2:187373800-187387000 Weak transcription Rectal Smooth Muscle rectum
35 chr2:187373800-187387800 Weak transcription Right Ventricle heart
36 chr2:187373800-187390200 Weak transcription Brain Anterior Caudate brain
37 chr2:187374000-187385800 Weak transcription Fetal Brain Female brain
38 chr2:187374000-187388600 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr2:187374200-187386400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr2:187374200-187386600 Weak transcription Colon Smooth Muscle Colon
41 chr2:187374200-187386600 Weak transcription Stomach Smooth Muscle stomach
42 chr2:187374400-187386400 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr2:187374400-187389800 Weak transcription Brain Germinal Matrix brain
44 chr2:187374400-187396200 Weak transcription Brain Substantia Nigra brain
45 chr2:187374400-187398800 Weak transcription Brain Inferior Temporal Lobe brain
46 chr2:187374600-187386000 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr2:187374800-187386000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr2:187374800-187387800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr2:187374800-187388400 Weak transcription NHLF lung
50 chr2:187375200-187387000 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015