The 2.0 version of rSNPBase

Variant report

Variant rs16827842
Chromosome Location chr2:187346873-187346874
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187320600-187347400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr2:187328000-187350400 Weak transcription Pancreas Pancrea
3 chr2:187337000-187347000 Weak transcription HepG2 liver
4 chr2:187337000-187348000 Weak transcription Duodenum Mucosa Duodenum
5 chr2:187339800-187347400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr2:187339800-187348400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr2:187339800-187349800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr2:187344000-187348000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr2:187345000-187347400 Enhancers NHEK skin
10 chr2:187346200-187348200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr2:187346400-187347600 Weak transcription Fetal Intestine Small intestine
12 chr2:187346400-187348600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr2:187346400-187348600 Weak transcription HMEC breast
14 chr2:187346400-187349200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr2:187346600-187348200 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr2:187346600-187350000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015