Variant report

Variant	rs13399648
Chromosome Location	chr2:190760127-190760128
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10178729	0.86[ASN][1000 genomes]
rs13401044	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13404927	0.82[AMR][1000 genomes]
rs41561515	0.94[EUR][1000 genomes]
rs55795880	0.82[EUR][1000 genomes]
rs5743161	0.82[EUR][1000 genomes]
rs5743164	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs5743169	0.82[EUR][1000 genomes]
rs5743175	0.94[EUR][1000 genomes]
rs5743187	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs5743189	0.81[EUR][1000 genomes]
rs5743204	0.94[EUR][1000 genomes]
rs58856396	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs59846629	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73042348	0.88[EUR][1000 genomes]
rs73042354	0.94[EUR][1000 genomes]
rs73042369	0.94[EUR][1000 genomes]
rs73044242	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73044270	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73044272	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73044274	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190758000-190761200	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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