Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:205891473..205893096-chr2:205894647..205896524,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10187682	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10198599	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10205931	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10207227	1.00[ASN][1000 genomes]
rs11677135	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13389161	1.00[ASN][1000 genomes]
rs13389502	1.00[ASN][1000 genomes]
rs13395282	1.00[ASN][1000 genomes]
rs13414808	1.00[ASN][1000 genomes]
rs13417895	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13419302	1.00[ASN][1000 genomes]
rs1355342	1.00[ASN][1000 genomes]
rs1434157	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2060399	1.00[ASN][1000 genomes]
rs28474701	1.00[ASN][1000 genomes]
rs6716363	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6731783	1.00[ASN][1000 genomes]
rs6761835	1.00[ASN][1000 genomes]
rs73053146	1.00[ASN][1000 genomes]
rs7566341	1.00[ASN][1000 genomes]
rs7593901	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs985164	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998485	chr2:205407813-206184006	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv536122	chr2:205407813-206184006	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv1010210	chr2:205489653-206076013	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv875728	chr2:205853136-205906945	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:205887800-205906200	Weak transcription	Pancreas	Pancrea
2	chr2:205890800-205895600	Weak transcription	HSMMtube	muscle
3	chr2:205890800-205897400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr2:205890800-205898800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr2:205890800-205899600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr2:205891000-205901000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr2:205891600-205897600	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr2:205894200-205895800	Weak transcription	Primary T cells from cord blood	blood
9	chr2:205894600-205897600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr2:205894800-205896400	Enhancers	HepG2	liver
11	chr2:205895200-205897600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr2:205895400-205895600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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