Variant report
Variant | rs73053146 |
---|---|
Chromosome Location | chr2:205773818-205773819 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:205769169..205772308-chr2:205773628..205776726,4 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10187682 | 1.00[ASN][1000 genomes] |
rs10198599 | 1.00[ASN][1000 genomes] |
rs10205931 | 1.00[ASN][1000 genomes] |
rs10207227 | 1.00[ASN][1000 genomes] |
rs11677135 | 1.00[ASN][1000 genomes] |
rs13389161 | 1.00[ASN][1000 genomes] |
rs13389502 | 1.00[ASN][1000 genomes] |
rs13395282 | 1.00[ASN][1000 genomes] |
rs13414808 | 1.00[ASN][1000 genomes] |
rs13417895 | 1.00[ASN][1000 genomes] |
rs13418029 | 1.00[ASN][1000 genomes] |
rs13419302 | 1.00[ASN][1000 genomes] |
rs1355342 | 1.00[ASN][1000 genomes] |
rs1434157 | 1.00[ASN][1000 genomes] |
rs2060399 | 1.00[ASN][1000 genomes] |
rs6716363 | 1.00[ASN][1000 genomes] |
rs6731783 | 1.00[ASN][1000 genomes] |
rs6761835 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7566341 | 1.00[ASN][1000 genomes] |
rs985164 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv998485 | chr2:205407813-206184006 | Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
2 | nsv536122 | chr2:205407813-206184006 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
3 | nsv1010210 | chr2:205489653-206076013 | Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
4 | esv2757846 | chr2:205539832-205841174 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
5 | esv2759111 | chr2:205539832-205841174 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:205772800-205775800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
2 | chr2:205773800-205774200 | Enhancers | NHDF-Ad | bronchial |