Variant report

Variant	rs13436419
Chromosome Location	chr5:151253444-151253445
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10037964	0.80[AFR][1000 genomes]
rs10055008	1.00[MKK][hapmap]
rs10079059	0.97[AFR][1000 genomes]
rs10214405	0.97[AFR][1000 genomes]
rs13358809	0.97[AFR][1000 genomes]
rs28551068	0.91[AFR][1000 genomes]
rs6871781	0.94[AFR][1000 genomes]
rs6885939	0.97[AFR][1000 genomes]
rs73285978	0.97[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1808837	chr5:151238149-151260215	Enhancers Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv3487128	chr5:151247859-151254357	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3487127	chr5:151248309-151254207	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3487129	chr5:151248309-151254207	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3471107	chr5:151249859-151254957	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151235200-151264200	Weak transcription	Pancreatic Islets	Pancreatic Islet

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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