Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10433893	0.81[ASN][1000 genomes]
rs10433991	0.81[ASN][1000 genomes]
rs11097768	0.87[ASN][1000 genomes]
rs11733720	0.81[ASN][1000 genomes]
rs13126885	0.86[CHB][hapmap]
rs151370	0.83[CHB][hapmap]
rs151371	0.86[CHB][hapmap]
rs1968543	0.81[ASN][1000 genomes]
rs2119209	0.81[ASN][1000 genomes]
rs2119213	0.81[CHB][hapmap];0.80[JPT][hapmap]
rs2165265	0.87[CHB][hapmap];0.81[JPT][hapmap]
rs438803	0.83[CHB][hapmap]
rs4476601	0.91[CHB][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs465144	0.89[CHB][hapmap]
rs4698991	0.89[ASN][1000 genomes]
rs58321370	0.81[ASN][1000 genomes]
rs62322235	0.90[ASN][1000 genomes]
rs62323488	0.81[ASN][1000 genomes]
rs62323492	0.81[ASN][1000 genomes]
rs62323541	0.81[ASN][1000 genomes]
rs6825428	0.81[ASN][1000 genomes]
rs6852794	0.81[ASN][1000 genomes]
rs7669715	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869164	chr4:102483189-103213842	Weak transcription Enhancers Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv428447	chr4:103103730-103262107	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103122200-103122600	Enhancers	HMEC	breast
2	chr4:103122200-103122600	Enhancers	NHEK	skin
3	chr4:103122400-103122600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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