Variant report
| Variant | rs1350972 |
|---|---|
| Chromosome Location | chr4:98200713-98200714 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:24)
| rs_ID | r2[population] |
|---|---|
| rs10005664 | 0.97[ASN][1000 genomes] |
| rs10009345 | 0.97[ASN][1000 genomes] |
| rs10012059 | 0.97[ASN][1000 genomes] |
| rs11097552 | 0.84[ASN][1000 genomes] |
| rs11721540 | 0.86[ASN][1000 genomes] |
| rs11721581 | 0.86[ASN][1000 genomes] |
| rs12641508 | 0.86[ASN][1000 genomes] |
| rs12643319 | 0.84[ASN][1000 genomes] |
| rs12644668 | 0.81[ASN][1000 genomes] |
| rs13105512 | 0.84[ASN][1000 genomes] |
| rs13111598 | 0.86[ASN][1000 genomes] |
| rs13115674 | 0.91[ASN][1000 genomes] |
| rs13143522 | 0.84[ASN][1000 genomes] |
| rs17461098 | 0.83[AFR][1000 genomes];0.97[ASN][1000 genomes] |
| rs28452709 | 0.91[ASN][1000 genomes] |
| rs28573378 | 0.83[AFR][1000 genomes];0.97[ASN][1000 genomes] |
| rs35196012 | 0.97[ASN][1000 genomes] |
| rs4235429 | 0.91[ASN][1000 genomes] |
| rs4431230 | 0.86[ASN][1000 genomes] |
| rs4635822 | 0.86[ASN][1000 genomes] |
| rs6532667 | 0.87[AFR][1000 genomes];0.99[ASN][1000 genomes] |
| rs6820487 | 0.86[ASN][1000 genomes] |
| rs6824393 | 0.95[ASN][1000 genomes] |
| rs6824861 | 0.95[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv879640 | chr4:97711707-98697586 | Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:98200000-98202200 | Enhancers | Dnd41 | blood |
