Variant report

Variant	rs1356064
Chromosome Location	chr2:180494241-180494242
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1399686	0.87[YRI][hapmap]
rs1515277	0.87[YRI][hapmap]
rs1515278	0.87[YRI][hapmap]
rs17820230	1.00[CEU][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3106709	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61515342	0.82[AMR][1000 genomes]
rs72953712	0.86[AMR][1000 genomes]
rs72953722	0.82[AMR][1000 genomes]
rs72953725	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72953754	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72957600	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72967298	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72969212	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72969215	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72969229	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs908285	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9750251	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs984893	1.00[CEU][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180486000-180494600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:180488400-180494600	Weak transcription	Lung	lung
3	chr2:180489600-180500800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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