Variant report

Variant	rs9750251
Chromosome Location	chr2:180500082-180500083
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1356064	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17820230	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3106709	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs61515342	0.89[AMR][1000 genomes]
rs72953712	0.92[AMR][1000 genomes]
rs72953722	0.89[AMR][1000 genomes]
rs72953725	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72953754	0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72957600	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72957991	0.83[AMR][1000 genomes]
rs72957994	0.83[AMR][1000 genomes]
rs72967298	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72969212	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72969215	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72969229	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs908285	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs984893	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180489600-180500800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr2:180495000-180502200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:180497000-180500800	Weak transcription	HepG2	liver
4	chr2:180497400-180500800	Weak transcription	Liver	Liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links