Variant report

Variant	rs136292
Chromosome Location	chr22:31189795-31189796
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1040422	0.99[ASN][1000 genomes]
rs136217	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs136234	0.84[EUR][1000 genomes]
rs136255	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs136256	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs136267	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs136318	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs136320	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs136329	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs136351	0.83[EUR][1000 genomes]
rs136354	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs136355	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs136356	0.80[AMR][1000 genomes]
rs5753300	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8141331	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31173800-31198200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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