Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs12483846	0.95[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12484930	0.95[AMR][1000 genomes]
rs136255	0.86[ASN][1000 genomes]
rs136256	0.86[ASN][1000 genomes]
rs136267	0.98[ASN][1000 genomes]
rs136292	0.99[ASN][1000 genomes]
rs136318	0.94[ASN][1000 genomes]
rs136320	0.92[ASN][1000 genomes]
rs136329	0.93[ASN][1000 genomes]
rs136348	0.81[ASN][1000 genomes]
rs55765123	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5749156	0.95[AMR][1000 genomes]
rs5749157	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5753280	0.88[AMR][1000 genomes]
rs5753281	0.89[AMR][1000 genomes]
rs5753285	0.95[AMR][1000 genomes]
rs5753287	0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs5753290	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5753292	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5753294	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5753295	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5753297	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs58467547	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61537428	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs62235882	0.95[AMR][1000 genomes]
rs62235892	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8141331	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8184976	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs909705	0.95[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31172800-31189400	Weak transcription	Fetal Heart	heart
2	chr22:31173800-31198200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr22:31178800-31187600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr22:31185200-31188400	Weak transcription	Brain Substantia Nigra	brain
5	chr22:31186200-31186400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr22:31186200-31186400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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