Variant report
| Variant | rs1366023 |
|---|---|
| Chromosome Location | chr12:46380161-46380162 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46299000-46381000 | Weak transcription | Brain Germinal Matrix | brain |
| 2 | chr12:46357000-46380400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 3 | chr12:46357800-46381200 | Weak transcription | Fetal Kidney | kidney |
| 4 | chr12:46358800-46380600 | Weak transcription | Spleen | Spleen |
| 5 | chr12:46360600-46381400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 6 | chr12:46360600-46381800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 7 | chr12:46360600-46383000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 8 | chr12:46361400-46383200 | Weak transcription | Lung | lung |
| 9 | chr12:46362800-46383400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr12:46363200-46380200 | Weak transcription | NHLF | lung |
| 11 | chr12:46363400-46380600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 12 | chr12:46363600-46380600 | Weak transcription | Fetal Stomach | stomach |
| 13 | chr12:46363600-46381800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 14 | chr12:46366400-46380200 | Weak transcription | Thymus | Thymus |
| 15 | chr12:46366400-46380600 | Weak transcription | Placenta | Placenta |
| 16 | chr12:46367400-46383200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr12:46367800-46380400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 18 | chr12:46368600-46380600 | Weak transcription | NH-A | brain |
| 19 | chr12:46368800-46380600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 20 | chr12:46369200-46380600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 21 | chr12:46369600-46380400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 22 | chr12:46369600-46380400 | Weak transcription | Pancreas | Pancrea |
| 23 | chr12:46370000-46381000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 24 | chr12:46370800-46382800 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 25 | chr12:46372000-46381000 | Weak transcription | Stomach Mucosa | stomach |
| 26 | chr12:46372200-46381000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 27 | chr12:46372400-46380800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr12:46372400-46381000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 29 | chr12:46372400-46381200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 30 | chr12:46372400-46383000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 31 | chr12:46372800-46381200 | Weak transcription | Brain Substantia Nigra | brain |
| 32 | chr12:46373000-46380400 | Weak transcription | Aorta | Aorta |
| 33 | chr12:46373000-46380800 | Weak transcription | Ovary | ovary |
| 34 | chr12:46373000-46383400 | Weak transcription | Esophagus | oesophagus |
| 35 | chr12:46373200-46382800 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 36 | chr12:46374200-46383000 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 37 | chr12:46374400-46380600 | Weak transcription | Brain Anterior Caudate | brain |
| 38 | chr12:46374600-46380600 | Weak transcription | Fetal Lung | lung |
| 39 | chr12:46374600-46381000 | Weak transcription | Osteobl | bone |
| 40 | chr12:46375000-46381000 | Weak transcription | Right Ventricle | heart |
| 41 | chr12:46375200-46380600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 42 | chr12:46375600-46380800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 43 | chr12:46375600-46381200 | Weak transcription | Fetal Intestine Small | intestine |
| 44 | chr12:46375600-46381400 | Weak transcription | HUVEC | blood vessel |
| 45 | chr12:46376400-46380800 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 46 | chr12:46377200-46380400 | Transcr. at gene 5' and 3' | GM12878-XiMat | blood |
| 47 | chr12:46378000-46380600 | Strong transcription | HSMM | muscle |
| 48 | chr12:46378200-46380600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 49 | chr12:46378200-46381600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 50 | chr12:46378400-46380200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
