Variant report
| Variant | rs6582578 |
|---|---|
| Chromosome Location | chr12:46335124-46335125 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46299000-46381000 | Weak transcription | Brain Germinal Matrix | brain |
| 2 | chr12:46312200-46348600 | Strong transcription | Dnd41 | blood |
| 3 | chr12:46314600-46345600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 4 | chr12:46316600-46343400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 5 | chr12:46317000-46341400 | Weak transcription | Gastric | stomach |
| 6 | chr12:46318800-46338600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 7 | chr12:46318800-46339200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr12:46319200-46341400 | Weak transcription | Lung | lung |
| 9 | chr12:46319200-46362800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 10 | chr12:46322400-46337400 | Weak transcription | Fetal Brain Female | brain |
| 11 | chr12:46322600-46335200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 12 | chr12:46322600-46338600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 13 | chr12:46322600-46340000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 14 | chr12:46322600-46341400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr12:46322600-46341400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 16 | chr12:46322600-46341400 | Weak transcription | Pancreas | Pancrea |
| 17 | chr12:46322600-46360200 | Weak transcription | Fetal Brain Male | brain |
| 18 | chr12:46322800-46338600 | Weak transcription | Esophagus | oesophagus |
| 19 | chr12:46323200-46341400 | Weak transcription | Colonic Mucosa | Colon |
| 20 | chr12:46323200-46341400 | Weak transcription | Fetal Stomach | stomach |
| 21 | chr12:46323200-46341400 | Weak transcription | Spleen | Spleen |
| 22 | chr12:46324400-46351600 | Weak transcription | Psoas Muscle | Psoas |
| 23 | chr12:46325000-46335400 | Weak transcription | Thymus | Thymus |
| 24 | chr12:46325000-46341400 | Weak transcription | Left Ventricle | heart |
| 25 | chr12:46325200-46343400 | Weak transcription | Right Ventricle | heart |
| 26 | chr12:46326200-46335200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 27 | chr12:46326200-46335400 | Weak transcription | NHLF | lung |
| 28 | chr12:46326600-46338400 | Weak transcription | Colon Smooth Muscle | Colon |
| 29 | chr12:46326600-46339400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 30 | chr12:46326600-46360400 | Weak transcription | Small Intestine | intestine |
| 31 | chr12:46326800-46336200 | Weak transcription | K562 | blood |
| 32 | chr12:46327000-46335600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 33 | chr12:46327000-46337000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 34 | chr12:46327200-46335400 | Weak transcription | HUVEC | blood vessel |
| 35 | chr12:46327200-46340600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 36 | chr12:46327600-46335200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 37 | chr12:46327800-46335400 | Weak transcription | Aorta | Aorta |
| 38 | chr12:46327800-46335600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 39 | chr12:46327800-46338600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 40 | chr12:46327800-46340000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 41 | chr12:46328800-46345200 | Strong transcription | HSMM | muscle |
| 42 | chr12:46329200-46338400 | Weak transcription | Brain Angular Gyrus | brain |
| 43 | chr12:46329200-46351800 | Weak transcription | Fetal Heart | heart |
| 44 | chr12:46329400-46337600 | Weak transcription | Brain Hippocampus Middle | brain |
| 45 | chr12:46329400-46338000 | Weak transcription | Brain Anterior Caudate | brain |
| 46 | chr12:46329400-46338400 | Weak transcription | Brain Substantia Nigra | brain |
| 47 | chr12:46329400-46344400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 48 | chr12:46329600-46335400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 49 | chr12:46329600-46341400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 50 | chr12:46329600-46342600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
