Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10131260	0.90[ASN][1000 genomes]
rs10131556	0.88[ASN][1000 genomes]
rs10131643	0.90[ASN][1000 genomes]
rs10134023	0.91[ASN][1000 genomes]
rs10138562	0.86[ASN][1000 genomes]
rs10143716	0.90[ASN][1000 genomes]
rs10146413	0.89[ASN][1000 genomes]
rs11847577	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs11851452	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs1489861	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1489864	1.00[CHB][hapmap];0.83[JPT][hapmap]
rs1844454	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2000250	0.84[CHB][hapmap]
rs2171832	0.90[ASN][1000 genomes]
rs2883560	0.85[CHB][hapmap]
rs60114110	0.97[ASN][1000 genomes]
rs60450551	0.89[ASN][1000 genomes]
rs60979554	0.97[ASN][1000 genomes]
rs61993924	0.90[ASN][1000 genomes]
rs7156869	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8014365	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043508	chr14:62750671-63150403	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv832813	chr14:62757220-62970305	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv1037232	chr14:62758045-63116423	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv949518	chr14:62777098-63123208	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv456323	chr14:62893766-62970049	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv564892	chr14:62893766-62970049	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
7	nsv983977	chr14:62966317-62970762	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	nsv525623	chr14:62968395-62968664	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:62967200-62968800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr14:62967200-62969200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search: