Variant report

Variant	rs1404585
Chromosome Location	chr7:108754883-108754884
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10225252	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10227370	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10272130	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10275557	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11770410	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1404584	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1525023	0.96[ASN][1000 genomes]
rs1581541	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2030738	0.96[ASN][1000 genomes]
rs2030739	0.94[ASN][1000 genomes]
rs2030741	0.97[ASN][1000 genomes]
rs4143238	0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6948286	0.92[ASN][1000 genomes]
rs6970149	0.97[ASN][1000 genomes]
rs7782995	0.97[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:108752600-108766800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links