Variant report

Variant	rs141673
Chromosome Location	chr10:119152175-119152176
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11197982	0.87[AFR][1000 genomes]
rs11197984	0.87[AFR][1000 genomes]
rs12269696	0.87[AFR][1000 genomes]
rs17546033	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17628621	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181441	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs181510	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs181518	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532812	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs363231	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs363294	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119149400-119152600	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr10:119150800-119152400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr10:119150800-119152400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:119150800-119152400	Enhancers	Esophagus	oesophagus
5	chr10:119150800-119152800	Enhancers	Liver	Liver
6	chr10:119151000-119152800	Enhancers	HepG2	liver
7	chr10:119151200-119152200	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr10:119151400-119152400	Enhancers	Lung	lung
9	chr10:119151400-119152600	Weak transcription	HSMMtube	muscle
10	chr10:119151600-119158800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr10:119151800-119152200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr10:119151800-119164400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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