Variant report

Variant	rs1423987
Chromosome Location	chr16:64748241-64748242
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:64741777..64745736-chr16:64747443..64750671,3	MCF-7	breast:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11859763	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11862881	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12446839	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12597618	0.85[ASN][1000 genomes]
rs12919603	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1423988	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1423997	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs179522	0.98[ASN][1000 genomes]
rs2107370	0.86[ASN][1000 genomes]
rs231034	0.99[ASN][1000 genomes]
rs231035	0.99[ASN][1000 genomes]
rs231037	0.99[ASN][1000 genomes]
rs231076	0.88[ASN][1000 genomes]
rs231078	0.88[ASN][1000 genomes]
rs231089	0.84[ASN][1000 genomes]
rs231091	0.84[ASN][1000 genomes]
rs231097	0.86[ASN][1000 genomes]
rs231104	0.86[ASN][1000 genomes]
rs231106	0.84[ASN][1000 genomes]
rs231111	0.86[ASN][1000 genomes]
rs2320127	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4967867	0.88[ASN][1000 genomes]
rs55840743	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6498959	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7185558	0.86[ASN][1000 genomes]
rs7190938	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7192050	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7200356	0.82[ASN][1000 genomes]
rs7200661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7206276	0.90[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64746400-64749800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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