Variant report

Variant	rs1428763
Chromosome Location	chr16:64916610-64916611
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs1560191	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72790824	1.00[AMR][1000 genomes]
rs72790845	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948640	chr16:64859061-65112790	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv457512	chr16:64887354-64935433	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv572900	chr16:64887354-64935433	Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64900800-64934400	Weak transcription	Fetal Brain Male	brain
2	chr16:64913800-64916800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr16:64914000-64917000	Enhancers	Muscle Satellite Cultured Cells	--
4	chr16:64914600-64916800	Enhancers	Fetal Kidney	kidney
5	chr16:64914800-64917000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr16:64916000-64916800	Enhancers	Sigmoid Colon	Sigmoid Colon
7	chr16:64916000-64917000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr16:64916000-64917000	Enhancers	Fetal Lung	lung
9	chr16:64916200-64916800	Enhancers	Left Ventricle	heart
10	chr16:64916200-64916800	Enhancers	Ovary	ovary
11	chr16:64916200-64917000	Enhancers	HSMMtube	muscle
12	chr16:64916400-64916800	Enhancers	Psoas Muscle	Psoas

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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