Variant report

Variant	rs1437839
Chromosome Location	chr4:173605829-173605830
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10016257	1.00[JPT][hapmap]
rs1437855	1.00[JPT][hapmap]
rs1437856	1.00[JPT][hapmap]
rs1540475	1.00[JPT][hapmap]
rs1540476	1.00[JPT][hapmap]
rs1561305	1.00[JPT][hapmap]
rs1561306	1.00[JPT][hapmap]
rs2124204	1.00[JPT][hapmap]
rs2332550	1.00[JPT][hapmap]
rs337981	1.00[JPT][hapmap]
rs338005	1.00[JPT][hapmap]
rs338049	1.00[JPT][hapmap]
rs338052	1.00[JPT][hapmap]
rs338054	1.00[JPT][hapmap]
rs338055	1.00[JPT][hapmap]
rs338056	1.00[JPT][hapmap]
rs4315754	1.00[JPT][hapmap]
rs4396969	1.00[JPT][hapmap]
rs538624	1.00[JPT][hapmap]
rs716645	1.00[JPT][hapmap]
rs716646	1.00[JPT][hapmap]
rs7656178	1.00[JPT][hapmap]
rs7686995	1.00[JPT][hapmap]
rs9992901	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031592	chr4:173112542-173662991	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv537359	chr4:173112542-173662991	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv534293	chr4:173121379-173606082	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
6	nsv880685	chr4:173562564-173661711	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv880613	chr4:173569281-173661711	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	esv3327952	chr4:173591786-173805861	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
9	nsv968024	chr4:173604337-173609980	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173601600-173606000	Enhancers	Placenta Amnion	Placenta Amnion

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