Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:112567436..112574679-chr17:59473442..59479631,13	MCF-7	breast:
2	chr1:112563385..112565098-chr1:112567061..112569834,2	K562	blood:
3	chr1:112565683..112570763-chr17:59483597..59489037,9	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs12724483	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12749667	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12751286	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1372861	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs171994	1.00[ASN][1000 genomes]
rs17739527	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819209	1.00[ASN][1000 genomes]
rs3008534	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3017628	1.00[ASN][1000 genomes]
rs34751177	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs367572	1.00[ASN][1000 genomes]
rs373157	1.00[ASN][1000 genomes]
rs374902	1.00[ASN][1000 genomes]
rs374958	1.00[ASN][1000 genomes]
rs400151	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4088223	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs430680	1.00[ASN][1000 genomes]
rs432663	1.00[ASN][1000 genomes]
rs434800	1.00[ASN][1000 genomes]
rs436173	1.00[ASN][1000 genomes]
rs436818	1.00[ASN][1000 genomes]
rs441740	1.00[ASN][1000 genomes]
rs443625	1.00[ASN][1000 genomes]
rs450822	1.00[ASN][1000 genomes]
rs455228	1.00[ASN][1000 genomes]
rs460443	1.00[ASN][1000 genomes]
rs461311	1.00[ASN][1000 genomes]
rs461553	1.00[ASN][1000 genomes]
rs462936	1.00[ASN][1000 genomes]
rs463983	1.00[ASN][1000 genomes]
rs464357	1.00[ASN][1000 genomes]
rs464819	1.00[ASN][1000 genomes]
rs466206	1.00[ASN][1000 genomes]
rs4838935	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs609882	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831048	chr1:112459697-112680279	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:112567600-112568600	Enhancers	Fetal Stomach	stomach
2	chr1:112567600-112569000	Enhancers	Spleen	Spleen
3	chr1:112567800-112569200	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr1:112567800-112569200	Enhancers	Skeletal Muscle Female	skeletal muscle

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