Variant report
| Variant | rs1444096 |
|---|---|
| Chromosome Location | chr12:59435110-59435111 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:59431000-59441800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr12:59431200-59437200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 3 | chr12:59433200-59437400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 4 | chr12:59433600-59435600 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 5 | chr12:59433600-59436200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 6 | chr12:59433800-59437000 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 7 | chr12:59433800-59437200 | Enhancers | HSMM | muscle |
| 8 | chr12:59434000-59435200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 9 | chr12:59434200-59435200 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 10 | chr12:59434200-59435200 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 11 | chr12:59434200-59435200 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 12 | chr12:59434200-59435200 | Enhancers | Adipose Nuclei | Adipose |
| 13 | chr12:59434200-59435200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 14 | chr12:59434200-59435600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 15 | chr12:59434200-59435800 | Enhancers | HSMMtube | muscle |
| 16 | chr12:59434200-59436000 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr12:59434200-59436000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 18 | chr12:59434200-59436000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 19 | chr12:59434200-59436000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 20 | chr12:59434200-59436000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 21 | chr12:59434200-59436200 | Enhancers | Fetal Stomach | stomach |
| 22 | chr12:59434200-59437000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 23 | chr12:59434200-59437200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 24 | chr12:59434400-59435200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 25 | chr12:59434400-59435200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 26 | chr12:59434400-59435200 | Flanking Active TSS | HMEC | breast |
| 27 | chr12:59434400-59435200 | Flanking Active TSS | NHEK | skin |
| 28 | chr12:59434400-59435400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 29 | chr12:59434400-59435800 | Enhancers | Ovary | ovary |
| 30 | chr12:59434400-59436000 | Enhancers | Fetal Lung | lung |
| 31 | chr12:59434400-59436000 | Flanking Active TSS | NH-A | brain |
| 32 | chr12:59434400-59436200 | Enhancers | Colon Smooth Muscle | Colon |
| 33 | chr12:59434600-59435600 | Weak transcription | Pancreas | Pancrea |
| 34 | chr12:59434600-59436000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 35 | chr12:59434800-59435200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 36 | chr12:59434800-59435200 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 37 | chr12:59434800-59435200 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 38 | chr12:59434800-59435200 | Flanking Active TSS | Hela-S3 | cervix |
| 39 | chr12:59434800-59435200 | Flanking Active TSS | NHDF-Ad | bronchial |
| 40 | chr12:59434800-59435200 | Flanking Active TSS | NHLF | lung |
| 41 | chr12:59434800-59435400 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 42 | chr12:59434800-59435400 | Flanking Active TSS | Osteobl | bone |
| 43 | chr12:59434800-59435600 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 44 | chr12:59434800-59435800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 45 | chr12:59434800-59435800 | Enhancers | Aorta | Aorta |
| 46 | chr12:59434800-59435800 | Enhancers | Rectal Smooth Muscle | rectum |
| 47 | chr12:59435000-59435200 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 48 | chr12:59435000-59435400 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 49 | chr12:59435000-59435600 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 50 | chr12:59435000-59435800 | Weak transcription | Stomach Mucosa | stomach |
