The 2.0 version of rSNPBase

Variant report

Variant rs1445388
Chromosome Location chr10:61595669-61595670
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61571400-61628000 Weak transcription Spleen Spleen
2 chr10:61571600-61595800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr10:61571600-61598400 Weak transcription Fetal Brain Female brain
4 chr10:61571600-61609200 Weak transcription NHLF lung
5 chr10:61571600-61616000 Weak transcription Fetal Kidney kidney
6 chr10:61572000-61615000 Weak transcription Colonic Mucosa Colon
7 chr10:61572400-61618800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr10:61573000-61598400 Weak transcription Placenta Amnion Placenta Amnion
9 chr10:61578000-61623200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr10:61578200-61597800 Weak transcription HSMMtube muscle
11 chr10:61578400-61603400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr10:61580200-61603200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr10:61580200-61605600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr10:61580200-61624200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr10:61580400-61624200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr10:61580600-61616200 Weak transcription Fetal Brain Male brain
17 chr10:61581000-61598000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr10:61581400-61597800 Weak transcription Brain Substantia Nigra brain
19 chr10:61583200-61606600 Weak transcription Pancreas Pancrea
20 chr10:61583200-61640600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr10:61584400-61607200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr10:61586000-61605600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr10:61586000-61612200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr10:61586200-61597800 Weak transcription Brain Cingulate Gyrus brain
25 chr10:61586400-61606600 Weak transcription Gastric stomach
26 chr10:61586400-61606800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr10:61587000-61612000 Weak transcription Ovary ovary
28 chr10:61589000-61598000 Weak transcription Right Atrium heart
29 chr10:61589200-61599000 Weak transcription NHDF-Ad bronchial
30 chr10:61589400-61616200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr10:61591400-61598800 Weak transcription Osteobl bone
32 chr10:61591600-61609400 Weak transcription Brain Germinal Matrix brain
33 chr10:61591800-61597000 Weak transcription Fetal Muscle Leg muscle
34 chr10:61591800-61597600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr10:61591800-61598000 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr10:61591800-61598400 Weak transcription Placenta Placenta
37 chr10:61591800-61598400 Weak transcription HSMM muscle
38 chr10:61591800-61599000 Weak transcription Muscle Satellite Cultured Cells --
39 chr10:61591800-61600800 Weak transcription H9 Cell Line embryonic stem cell
40 chr10:61591800-61601400 Weak transcription Fetal Stomach stomach
41 chr10:61591800-61603200 Weak transcription Hela-S3 cervix
42 chr10:61591800-61607200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr10:61591800-61607600 Weak transcription A549 lung
44 chr10:61591800-61609000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr10:61591800-61624000 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr10:61592000-61600400 Weak transcription Fetal Muscle Trunk muscle
47 chr10:61592000-61601400 Weak transcription Fetal Intestine Small intestine
48 chr10:61592200-61597000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr10:61592200-61597800 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr10:61592200-61598000 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015