Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1011537	0.80[AMR][1000 genomes]
rs10498911	1.00[EUR][1000 genomes]
rs1381670	0.84[ASN][1000 genomes]
rs1381671	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1381673	0.80[AMR][1000 genomes]
rs1457945	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1463536	0.84[ASN][1000 genomes]
rs16888079	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs16888187	1.00[EUR][1000 genomes]
rs16888196	1.00[EUR][1000 genomes]
rs1824642	0.80[AMR][1000 genomes]
rs4706634	0.84[ASN][1000 genomes]
rs4706635	0.80[AMR][1000 genomes]
rs57550972	0.89[AMR][1000 genomes]
rs58519993	1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs59096891	1.00[EUR][1000 genomes]
rs59710034	1.00[EUR][1000 genomes]
rs61006306	1.00[EUR][1000 genomes]
rs6907328	0.80[AMR][1000 genomes]
rs6908609	0.84[ASN][1000 genomes]
rs6921448	0.80[AMR][1000 genomes]
rs73759172	1.00[EUR][1000 genomes]
rs73759173	1.00[EUR][1000 genomes]
rs73759174	1.00[EUR][1000 genomes]
rs73759175	1.00[EUR][1000 genomes]
rs7751987	0.84[ASN][1000 genomes]
rs7769300	0.84[ASN][1000 genomes]
rs9294028	0.84[ASN][1000 genomes]
rs936499	0.84[ASN][1000 genomes]
rs9447787	1.00[EUR][1000 genomes]
rs9447789	1.00[EUR][1000 genomes]
rs9447839	1.00[EUR][1000 genomes]
rs9986557	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019520	chr6:77355212-77875164	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv538321	chr6:77355212-77875164	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv886218	chr6:77415155-77500526	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv886220	chr6:77415155-77505717	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv886219	chr6:77415155-77515516	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:77487400-77498800	Weak transcription	Pancreas	Pancrea

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