Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1023902	1.00[CEU][hapmap]
rs10734374	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1461372	1.00[CEU][hapmap]
rs1461381	1.00[CEU][hapmap]
rs1585497	1.00[EUR][1000 genomes]
rs1841569	1.00[CEU][hapmap]
rs2045704	1.00[CEU][hapmap]
rs2169340	1.00[CEU][hapmap]
rs2201335	0.82[CEU][hapmap]
rs2219616	1.00[CEU][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4378340	0.96[EUR][1000 genomes]
rs4500442	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4505017	0.82[CEU][hapmap]
rs55701824	0.82[EUR][1000 genomes]
rs55740663	0.87[EUR][1000 genomes]
rs57297880	0.87[EUR][1000 genomes]
rs57378086	0.87[EUR][1000 genomes]
rs72876941	1.00[EUR][1000 genomes]
rs72886219	0.87[EUR][1000 genomes]
rs72886220	0.87[EUR][1000 genomes]
rs72886223	0.87[EUR][1000 genomes]
rs72886227	0.87[EUR][1000 genomes]
rs72886232	0.87[EUR][1000 genomes]
rs72886237	0.87[EUR][1000 genomes]
rs72886263	0.87[EUR][1000 genomes]
rs72886276	0.87[EUR][1000 genomes]
rs72886282	0.87[EUR][1000 genomes]
rs7945236	1.00[CEU][hapmap]
rs986059	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422406	chr11:26329870-26473641	Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: