Variant report

Variant	rs1473046
Chromosome Location	chr14:84281739-84281740
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1473045	1.00[EUR][1000 genomes]
rs1754370	1.00[EUR][1000 genomes]
rs7145396	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7146785	1.00[AMR][1000 genomes]
rs7150401	1.00[AMR][1000 genomes]
rs74068257	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068259	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068260	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068261	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068267	1.00[AMR][1000 genomes]
rs74068274	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068276	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068279	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046869	chr14:83749048-84284813	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv542152	chr14:83749048-84284813	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2758365	chr14:84136458-84293840	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv2760003	chr14:84136458-84293840	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv832844	chr14:84136460-84293827	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	esv3442561	chr14:84281599-84283497	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84280600-84284200	Enhancers	Hela-S3	cervix
2	chr14:84281400-84283000	Enhancers	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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