Variant report

Variant	rs74068276
Chromosome Location	chr14:84334041-84334042
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1473045	1.00[EUR][1000 genomes]
rs1473046	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1754370	1.00[EUR][1000 genomes]
rs7145396	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7146785	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7150401	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068257	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068259	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068260	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068261	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068267	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068274	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74068279	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751287	chr14:84294487-84338247	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv565375	chr14:84299666-84336944	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1054166	chr14:84299761-84338200	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1036610	chr14:84299761-84338626	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1051093	chr14:84303380-84338626	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv431019	chr14:84303525-84365447	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv520014	chr14:84311967-84336944	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84330000-84336200	Weak transcription	Fetal Brain Female	brain
2	chr14:84332200-84334600	Enhancers	Fetal Stomach	stomach
3	chr14:84333400-84334600	Enhancers	Fetal Heart	heart
4	chr14:84333800-84334200	Enhancers	Brain Germinal Matrix	brain
5	chr14:84333800-84334200	Enhancers	Duodenum Smooth Muscle	Duodenum
6	chr14:84333800-84334600	Enhancers	Fetal Muscle Leg	muscle
7	chr14:84333800-84334600	Enhancers	Ovary	ovary
8	chr14:84334000-84334200	Enhancers	Fetal Lung	lung
9	chr14:84334000-84334600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr14:84334000-84334600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr14:84334000-84334600	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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