Variant report

Variant	rs7150401
Chromosome Location	chr14:84308601-84308602
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1473046	1.00[AMR][1000 genomes]
rs7145396	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7146785	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068257	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068259	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068260	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068261	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068267	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068274	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068276	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74068279	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751287	chr14:84294487-84338247	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv565375	chr14:84299666-84336944	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1054166	chr14:84299761-84338200	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1036610	chr14:84299761-84338626	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1051093	chr14:84303380-84338626	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv431019	chr14:84303525-84365447	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84307800-84308800	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr14:84308000-84308800	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr14:84308200-84309000	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr14:84308200-84309000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:84308400-84309000	Enhancers	H9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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