Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12676407	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16925454	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1955227	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4257994	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4607595	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4738787	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs527166	0.88[EUR][1000 genomes]
rs56203327	0.91[AFR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58546633	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs601224	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61514252	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62510024	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs627542	0.89[EUR][1000 genomes]
rs6471836	0.91[AFR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6471845	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs674292	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6984918	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6985045	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6996720	0.95[EUR][1000 genomes]
rs7001936	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831331	chr8:60770382-60959633	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60828400-60832200	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:60828600-60834800	Weak transcription	Fetal Stomach	stomach
3	chr8:60828800-60834000	Weak transcription	Stomach Smooth Muscle	stomach
4	chr8:60829200-60830400	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr8:60830000-60830400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:60830000-60831200	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr8:60830000-60834000	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr8:60830000-60834200	Enhancers	Primary B cells from peripheral blood	blood
9	chr8:60830200-60830400	Enhancers	GM12878-XiMat	blood
10	chr8:60830200-60833600	Weak transcription	Sigmoid Colon	Sigmoid Colon

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