Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12676407	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1497032	0.83[ASN][1000 genomes]
rs1497041	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16925454	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1955227	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4257994	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4607595	0.93[EUR][1000 genomes]
rs4738787	0.95[EUR][1000 genomes]
rs527166	0.87[EUR][1000 genomes]
rs56203327	0.88[EUR][1000 genomes]
rs58546633	0.93[EUR][1000 genomes]
rs601224	0.89[EUR][1000 genomes]
rs61514252	0.93[EUR][1000 genomes]
rs62510024	0.92[EUR][1000 genomes]
rs627542	0.88[EUR][1000 genomes]
rs6471836	0.84[EUR][1000 genomes]
rs6471843	0.83[ASN][1000 genomes]
rs6471844	0.84[ASN][1000 genomes]
rs6471845	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs674292	0.88[EUR][1000 genomes]
rs6985045	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6996720	0.95[EUR][1000 genomes]
rs7001936	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7845735	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831331	chr8:60770382-60959633	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60848400-60849200	Enhancers	Rectal Smooth Muscle	rectum
2	chr8:60848600-60849200	Weak transcription	Colon Smooth Muscle	Colon

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