Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:21058401..21059994-chr3:21063772..21066035,2	K562	blood:
2	chr3:21062603..21065448-chr3:21079335..21081512,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11128983	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13086550	0.86[EUR][1000 genomes]
rs13097458	0.98[ASN][1000 genomes]
rs1391138	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1497510	0.94[AFR][1000 genomes]
rs2886728	0.84[EUR][1000 genomes]
rs4306882	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4431129	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4431130	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4465961	0.96[ASN][1000 genomes]
rs4858288	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6550561	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6550562	0.89[EUR][1000 genomes]
rs7612422	0.93[ASN][1000 genomes]
rs7623704	0.93[ASN][1000 genomes]
rs7625772	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7633632	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7644744	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7652147	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs869494	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs869495	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs973870	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9811079	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9850499	0.86[ASN][1000 genomes]
rs985536	0.86[ASN][1000 genomes]
rs9865061	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9881998	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876607	chr3:20972475-21087219	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
2	nsv876608	chr3:21008710-21203048	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv998068	chr3:21050191-21212603	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2422219	chr3:21064893-21220097	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:21059000-21065800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:21065000-21065400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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