Variant report
| Variant | rs1498123 |
|---|---|
| Chromosome Location | chr1:179681979-179681980 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:18)
| rs_ID | r2[population] |
|---|---|
| rs10798713 | 0.85[CHB][hapmap];0.95[JPT][hapmap] |
| rs10913868 | 0.90[CHB][hapmap];0.84[ASN][1000 genomes] |
| rs10913870 | 0.84[ASN][1000 genomes] |
| rs10913871 | 0.84[ASN][1000 genomes] |
| rs10913872 | 0.84[ASN][1000 genomes] |
| rs12037882 | 0.84[ASN][1000 genomes] |
| rs12403719 | 0.83[ASN][1000 genomes] |
| rs12403967 | 0.83[ASN][1000 genomes] |
| rs12562455 | 0.84[ASN][1000 genomes] |
| rs12565113 | 0.84[ASN][1000 genomes] |
| rs12737143 | 0.89[CHB][hapmap];0.84[ASN][1000 genomes] |
| rs1391434 | 0.90[CHB][hapmap] |
| rs2318386 | 0.83[ASN][1000 genomes] |
| rs3843267 | 0.82[CHB][hapmap];0.88[CHD][hapmap] |
| rs3897919 | 0.82[CHB][hapmap] |
| rs3905117 | 0.82[CHB][hapmap] |
| rs4266841 | 0.83[ASN][1000 genomes] |
| rs4565670 | 0.83[ASN][1000 genomes] |
mRNA abundance (count:1)
| SNP | Gene | Cis/trans | Tissue | Source |
|---|---|---|---|---|
| rs1498123 | TOR1AIP1 | cis | parietal | SCAN |
Chromatin state (count:0 , 50 per page) page:
| No data |
