Variant report

Variant	rs1515276
Chromosome Location	chr2:180493959-180493960
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10172379	0.96[ASN][1000 genomes]
rs10192634	0.91[JPT][hapmap]
rs12476520	0.90[JPT][hapmap]
rs1515269	0.90[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes]
rs1588848	0.90[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs2222030	0.91[JPT][hapmap]
rs3112943	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3112960	0.81[YRI][hapmap]
rs3112963	0.91[JPT][hapmap];0.81[YRI][hapmap]
rs3112965	0.90[JPT][hapmap]
rs872162	0.81[JPT][hapmap]
rs925751	0.81[YRI][hapmap]
rs925753	0.84[CEU][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180486000-180494600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:180488400-180494600	Weak transcription	Lung	lung
3	chr2:180489600-180500800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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