Variant report
| Variant | rs1516557 |
|---|---|
| Chromosome Location | chr12:39284985-39284986 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:39269800-39285800 | Weak transcription | Osteobl | bone |
| 2 | chr12:39271800-39297200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 3 | chr12:39277800-39287200 | Weak transcription | Aorta | Aorta |
| 4 | chr12:39279800-39285800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 5 | chr12:39280000-39285600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 6 | chr12:39280400-39287200 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr12:39280800-39285800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 8 | chr12:39281000-39285800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr12:39281000-39286000 | Weak transcription | Gastric | stomach |
| 10 | chr12:39282200-39285800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 11 | chr12:39282800-39285200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 12 | chr12:39282800-39285200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 13 | chr12:39283200-39285000 | Enhancers | Primary hematopoietic stem cells | blood |
| 14 | chr12:39283400-39285800 | Enhancers | Liver | Liver |
| 15 | chr12:39283600-39285800 | Weak transcription | Esophagus | oesophagus |
| 16 | chr12:39283800-39285000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 17 | chr12:39283800-39285800 | Weak transcription | Left Ventricle | heart |
| 18 | chr12:39283800-39285800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 19 | chr12:39284000-39285000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 20 | chr12:39284200-39289600 | Weak transcription | Adipose Nuclei | Adipose |
| 21 | chr12:39284400-39285000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 22 | chr12:39284400-39285600 | Weak transcription | Hela-S3 | cervix |
| 23 | chr12:39284400-39285800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr12:39284600-39285600 | Weak transcription | Fetal Intestine Small | intestine |
| 25 | chr12:39284600-39285600 | Weak transcription | A549 | lung |
| 26 | chr12:39284600-39285800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 27 | chr12:39284600-39285800 | Weak transcription | Stomach Mucosa | stomach |
| 28 | chr12:39284600-39285800 | Weak transcription | HMEC | breast |
| 29 | chr12:39284600-39286000 | Weak transcription | Colon Smooth Muscle | Colon |
| 30 | chr12:39284600-39286000 | Weak transcription | NHEK | skin |
| 31 | chr12:39284600-39289200 | Weak transcription | HUVEC | blood vessel |
| 32 | chr12:39284800-39286000 | Enhancers | Lung | lung |
| 33 | chr12:39284800-39286400 | Enhancers | Right Atrium | heart |
| 34 | chr12:39284800-39288800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
