Variant report

Variant rs1520246
Chromosome Location chr5:127266725-127266726
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127261800-127270200 Weak transcription NHEK skin
2 chr5:127262800-127272000 Weak transcription Small Intestine intestine
3 chr5:127264200-127270400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr5:127265400-127267400 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr5:127266000-127266800 Enhancers Stomach Mucosa stomach
6 chr5:127266000-127266800 Enhancers HSMMtube muscle
7 chr5:127266000-127267200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr5:127266200-127270400 Weak transcription HSMM muscle
9 chr5:127266400-127266800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr5:127266400-127266800 Enhancers Gastric stomach
11 chr5:127266400-127266800 Enhancers Pancreas Pancrea
12 chr5:127266400-127267200 Enhancers Esophagus oesophagus
13 chr5:127266400-127267400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:127266400-127270600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr5:127266600-127266800 Flanking Active TSS A549 lung
16 chr5:127266600-127269800 Weak transcription Hela-S3 cervix
17 chr5:127266600-127270000 Weak transcription Muscle Satellite Cultured Cells --
18 chr5:127266600-127270000 Weak transcription HMEC breast
19 chr5:127266600-127270200 Weak transcription Osteobl bone
20 chr5:127266600-127270400 Weak transcription HUVEC blood vessel
21 chr5:127266600-127270800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:127266600-127270800 Weak transcription NH-A brain
23 chr5:127266600-127277000 Weak transcription Aorta Aorta

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