Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs13101345	0.88[ASN][1000 genomes]
rs13109709	0.94[ASN][1000 genomes]
rs13120907	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1357249	0.88[ASN][1000 genomes]
rs1464498	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1522217	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1522219	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1522220	1.00[ASN][1000 genomes]
rs1522222	0.89[ASN][1000 genomes]
rs1818785	0.97[ASN][1000 genomes]
rs2204100	0.89[ASN][1000 genomes]
rs2461472	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2648027	0.89[ASN][1000 genomes]
rs2648028	0.89[ASN][1000 genomes]
rs2648049	0.89[ASN][1000 genomes]
rs2648070	0.89[ASN][1000 genomes]
rs2686310	0.89[ASN][1000 genomes]
rs2686312	0.91[ASN][1000 genomes]
rs2691807	0.98[ASN][1000 genomes]
rs2903418	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3932349	0.87[ASN][1000 genomes]
rs4612008	0.95[ASN][1000 genomes]
rs56392925	0.84[ASN][1000 genomes]
rs6533256	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7658722	0.91[ASN][1000 genomes]
rs7672970	0.89[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs1522221	DKK2	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107415200-107450200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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