Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs13101345	0.90[ASN][1000 genomes]
rs13109709	0.96[ASN][1000 genomes]
rs13120907	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1357249	0.90[ASN][1000 genomes]
rs1464498	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1522217	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1522219	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1522220	0.98[ASN][1000 genomes]
rs1522221	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1522222	0.91[ASN][1000 genomes]
rs1818785	0.99[ASN][1000 genomes]
rs2204100	0.91[ASN][1000 genomes]
rs2648027	0.91[ASN][1000 genomes]
rs2648028	0.91[ASN][1000 genomes]
rs2648049	0.91[ASN][1000 genomes]
rs2648070	0.91[ASN][1000 genomes]
rs2686310	0.91[ASN][1000 genomes]
rs2686312	0.93[ASN][1000 genomes]
rs2691807	0.99[ASN][1000 genomes]
rs2903418	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3932349	0.89[ASN][1000 genomes]
rs4612008	0.97[ASN][1000 genomes]
rs56392925	0.86[ASN][1000 genomes]
rs6533256	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7658722	0.93[ASN][1000 genomes]
rs7672970	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3334946	chr4:107433178-107433418	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107415200-107450200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search: