Variant report

Variant	rs1526624
Chromosome Location	chr2:76509738-76509739
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10865419	0.95[CHB][hapmap];0.90[CHD][hapmap];0.82[JPT][hapmap];0.84[MKK][hapmap];0.94[ASN][1000 genomes]
rs11887752	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12615757	1.00[ASW][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];0.82[JPT][hapmap];0.94[MKK][hapmap];0.82[YRI][hapmap];0.95[ASN][1000 genomes]
rs12616451	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12622814	0.97[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1526644	0.86[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.94[ASN][1000 genomes]
rs17012424	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17012428	0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17012430	0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17012485	0.95[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4852400	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58987310	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76508600-76510600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr2:76508800-76520200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:76509600-76515200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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