Variant report

Variant rs1530042
Chromosome Location chr4:166389558-166389559
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:166380200-166390200 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr4:166381800-166391000 Weak transcription Fetal Intestine Small intestine
3 chr4:166382800-166391400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr4:166383000-166389800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:166383000-166391000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:166383200-166391400 Weak transcription Fetal Lung lung
7 chr4:166383800-166389800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr4:166384200-166390200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr4:166384200-166391800 Weak transcription Fetal Muscle Leg muscle
10 chr4:166385800-166391400 Weak transcription Pancreas Pancrea
11 chr4:166386000-166391600 Weak transcription Brain Hippocampus Middle brain
12 chr4:166386000-166392600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr4:166386000-166393000 Weak transcription Brain Cingulate Gyrus brain
14 chr4:166386400-166394000 Weak transcription Brain Substantia Nigra brain
15 chr4:166386400-166414400 Weak transcription Fetal Brain Male brain
16 chr4:166387200-166391600 Strong transcription HepG2 liver
17 chr4:166387400-166391400 Weak transcription Brain Angular Gyrus brain
18 chr4:166387800-166391800 Weak transcription Fetal Muscle Trunk muscle
19 chr4:166388200-166397000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr4:166388400-166390600 Strong transcription Aorta Aorta
21 chr4:166388400-166390800 Strong transcription Fetal Intestine Large intestine
22 chr4:166388400-166391600 Strong transcription Fetal Brain Female brain
23 chr4:166388400-166391800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr4:166388600-166392000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr4:166388800-166391400 Strong transcription Cortex derived primary cultured neurospheres brain
26 chr4:166388800-166392200 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr4:166389000-166389800 Strong transcription Ovary ovary
28 chr4:166389000-166392800 Strong transcription Brain Inferior Temporal Lobe brain
29 chr4:166389000-166393600 Strong transcription Brain Anterior Caudate brain
30 chr4:166389200-166390200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr4:166389200-166390400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr4:166389200-166392200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr4:166389400-166390400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr4:166389400-166390400 Weak transcription Fetal Stomach stomach
35 chr4:166389400-166391400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr4:166389400-166391400 Strong transcription Brain Germinal Matrix brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links