The 2.0 version of rSNPBase

Variant report

Variant rs1540367
Chromosome Location chr2:206168178-206168179
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:206097200-206170600 Weak transcription HSMMtube muscle
2 chr2:206154200-206168200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:206157000-206170400 Weak transcription H1 Cell Line embryonic stem cell
4 chr2:206157000-206170800 Weak transcription Aorta Aorta
5 chr2:206157400-206169400 Weak transcription Fetal Intestine Small intestine
6 chr2:206157400-206170800 Weak transcription Pancreas Pancrea
7 chr2:206160000-206169800 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:206160200-206169800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr2:206161200-206168800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:206161200-206177000 Weak transcription Colon Smooth Muscle Colon
11 chr2:206163800-206177200 Weak transcription Fetal Lung lung
12 chr2:206164400-206169800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr2:206164600-206168600 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr2:206165200-206171000 Weak transcription Left Ventricle heart
15 chr2:206165600-206177200 Weak transcription Rectal Smooth Muscle rectum
16 chr2:206165800-206168600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr2:206165800-206168600 Weak transcription Right Ventricle heart
18 chr2:206166000-206168600 Strong transcription Stomach Smooth Muscle stomach
19 chr2:206166000-206169200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:206166200-206168600 Weak transcription Brain Anterior Caudate brain
21 chr2:206166200-206170000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:206166400-206168200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:206166600-206171600 Weak transcription Liver Liver
24 chr2:206167000-206168400 Strong transcription Fetal Stomach stomach
25 chr2:206167000-206168600 Strong transcription Ovary ovary
26 chr2:206167200-206168600 Strong transcription Fetal Intestine Large intestine
27 chr2:206167400-206168800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:206167400-206168800 Strong transcription Duodenum Smooth Muscle Duodenum
29 chr2:206167400-206169600 Strong transcription Adipose Nuclei Adipose
30 chr2:206167600-206172400 Weak transcription Fetal Muscle Trunk muscle
31 chr2:206167800-206170400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015