Variant report

Variant rs154603
Chromosome Location chr5:115830050-115830051
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115791600-115838000 Weak transcription Right Ventricle heart
2 chr5:115796000-115833400 Strong transcription HUES64 Cell Line embryonic stem cell
3 chr5:115797000-115834800 Strong transcription H1 Cell Line embryonic stem cell
4 chr5:115797000-115838400 Strong transcription Placenta Placenta
5 chr5:115797400-115833800 Strong transcription iPS-18 Cell Line embryonic stem cell
6 chr5:115797600-115834600 Strong transcription H9 Cell Line embryonic stem cell
7 chr5:115797800-115834800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr5:115798000-115833200 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr5:115798000-115834600 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr5:115799000-115830400 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr5:115799400-115832000 Strong transcription Fetal Muscle Trunk muscle
12 chr5:115803400-115833200 Strong transcription iPS-15b Cell Line embryonic stem cell
13 chr5:115813600-115831800 Strong transcription Fetal Stomach stomach
14 chr5:115813600-115832000 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr5:115813800-115830600 Weak transcription HepG2 liver
16 chr5:115813800-115833600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr5:115813800-115851000 Weak transcription Liver Liver
18 chr5:115814000-115830200 Weak transcription Esophagus oesophagus
19 chr5:115814000-115850200 Weak transcription Small Intestine intestine
20 chr5:115816000-115830400 Weak transcription Lung lung
21 chr5:115816000-115838400 Weak transcription Spleen Spleen
22 chr5:115816400-115830400 Weak transcription Primary B cells from cord blood blood
23 chr5:115816800-115840000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr5:115818600-115833200 Weak transcription Fetal Brain Male brain
25 chr5:115820000-115830200 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr5:115820000-115832600 Strong transcription Cortex derived primary cultured neurospheres brain
27 chr5:115821400-115833400 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr5:115822600-115832200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr5:115823000-115842600 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr5:115823200-115832000 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr5:115824000-115833600 Weak transcription Ovary ovary
32 chr5:115825400-115830200 Weak transcription Left Ventricle heart
33 chr5:115825600-115833200 Strong transcription ES-I3 Cell Line embryonic stem cell
34 chr5:115827000-115830200 Enhancers NHEK skin
35 chr5:115827600-115832200 Strong transcription Fetal Muscle Leg muscle
36 chr5:115827800-115830200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr5:115827800-115830200 Enhancers Fetal Heart heart
38 chr5:115827800-115830400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr5:115828000-115831800 Strong transcription Fetal Brain Female brain
40 chr5:115828200-115830200 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr5:115828200-115830200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr5:115828200-115865400 Weak transcription Primary T cells from cord blood blood
43 chr5:115828400-115830600 Weak transcription Colon Smooth Muscle Colon
44 chr5:115828600-115830600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr5:115828600-115831800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr5:115828600-115833600 Strong transcription ES-WA7 Cell Line embryonic stem cell
47 chr5:115828800-115830200 Weak transcription Brain Angular Gyrus brain
48 chr5:115828800-115830400 Weak transcription Primary B cells from peripheral blood blood
49 chr5:115828800-115830400 Weak transcription HSMM muscle
50 chr5:115828800-115831200 Weak transcription HSMMtube muscle

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