Variant report

Variant	rs1546921
Chromosome Location	chr1:84240360-84240361
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10159391	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11163825	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17129520	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2389652	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6576943	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6576946	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6576947	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6699405	0.96[CEU][hapmap];0.83[JPT][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7552393	0.96[CEU][hapmap];0.84[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs761405	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs997248	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84237200-84241600	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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