Variant report
| Variant | rs1553225 |
|---|---|
| Chromosome Location | chr3:111658965-111658966 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:111631000-111672000 | Weak transcription | Fetal Intestine Small | intestine |
| 2 | chr3:111631000-111673400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 3 | chr3:111635200-111665600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 4 | chr3:111637200-111690600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr3:111638600-111659200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 6 | chr3:111639200-111675400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr3:111639800-111661000 | Weak transcription | Primary B cells from cord blood | blood |
| 8 | chr3:111642200-111674400 | Weak transcription | Lung | lung |
| 9 | chr3:111642200-111690400 | Weak transcription | Spleen | Spleen |
| 10 | chr3:111643400-111660000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 11 | chr3:111645200-111663600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 12 | chr3:111645400-111665400 | Weak transcription | Right Atrium | heart |
| 13 | chr3:111645400-111689600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 14 | chr3:111646400-111671000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 15 | chr3:111648600-111659600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 16 | chr3:111648600-111674800 | Weak transcription | Psoas Muscle | Psoas |
| 17 | chr3:111650200-111670000 | Strong transcription | Liver | Liver |
| 18 | chr3:111651000-111660000 | Weak transcription | Pancreas | Pancrea |
| 19 | chr3:111651200-111660000 | Weak transcription | Aorta | Aorta |
| 20 | chr3:111652200-111665600 | Weak transcription | Small Intestine | intestine |
| 21 | chr3:111652400-111685800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 22 | chr3:111653000-111686200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 23 | chr3:111653600-111664000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr3:111654400-111695000 | Strong transcription | Placenta | Placenta |
| 25 | chr3:111654800-111667000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 26 | chr3:111655600-111660000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 27 | chr3:111655600-111662400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 28 | chr3:111656600-111659200 | Weak transcription | NHDF-Ad | bronchial |
| 29 | chr3:111656600-111661400 | Strong transcription | NHEK | skin |
| 30 | chr3:111656600-111672000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 31 | chr3:111656600-111673200 | Weak transcription | Stomach Mucosa | stomach |
| 32 | chr3:111656600-111674600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 33 | chr3:111656600-111679200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 34 | chr3:111657000-111659400 | Weak transcription | NHLF | lung |
| 35 | chr3:111657000-111661800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 36 | chr3:111657000-111662600 | Strong transcription | HMEC | breast |
| 37 | chr3:111657000-111662800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 38 | chr3:111657000-111665600 | Strong transcription | NH-A | brain |
| 39 | chr3:111657000-111666200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 40 | chr3:111657200-111660400 | Strong transcription | Hela-S3 | cervix |
| 41 | chr3:111657200-111665600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 42 | chr3:111657200-111672600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 43 | chr3:111657200-111682000 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 44 | chr3:111657400-111661800 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 45 | chr3:111657400-111662000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 46 | chr3:111657400-111665800 | Strong transcription | HSMM | muscle |
| 47 | chr3:111657400-111673000 | Strong transcription | Osteobl | bone |
| 48 | chr3:111657600-111661400 | Strong transcription | Fetal Muscle Leg | muscle |
| 49 | chr3:111657800-111662000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 50 | chr3:111657800-111674600 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
