The 2.0 version of rSNPBase

Variant report

Variant rs1565306
Chromosome Location chr4:143302945-143302946
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143290400-143305800 Weak transcription Primary hematopoietic stem cells blood
2 chr4:143290400-143322000 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr4:143294200-143305400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr4:143295200-143305000 Weak transcription Small Intestine intestine
5 chr4:143296600-143310200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr4:143299000-143303200 Enhancers Primary T helper cells fromperipheralblood blood
7 chr4:143299800-143303200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr4:143299800-143304600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr4:143300200-143326200 Weak transcription Aorta Aorta
10 chr4:143300600-143304600 Weak transcription Primary T cells from cord blood blood
11 chr4:143301200-143304400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr4:143301200-143308600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr4:143301200-143326200 Weak transcription Gastric stomach
14 chr4:143301400-143303400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr4:143301400-143304200 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr4:143301400-143304400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr4:143301400-143308000 Weak transcription Fetal Muscle Leg muscle
18 chr4:143301400-143316200 Weak transcription Dnd41 blood
19 chr4:143301600-143303200 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr4:143301600-143303400 Weak transcription Pancreas Pancrea
21 chr4:143301600-143303600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr4:143301600-143304000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr4:143301600-143304200 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr4:143301600-143304400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr4:143301600-143304400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr4:143301600-143304600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr4:143301600-143304800 Weak transcription Placenta Placenta
28 chr4:143301600-143305000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr4:143301600-143306000 Weak transcription Right Ventricle heart
30 chr4:143301600-143308000 Weak transcription Primary T cells fromperipheralblood blood
31 chr4:143301600-143308200 Weak transcription Osteobl bone
32 chr4:143301600-143312400 Weak transcription Psoas Muscle Psoas
33 chr4:143301600-143317400 Weak transcription NH-A brain
34 chr4:143301600-143322800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr4:143301600-143323200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr4:143301600-143325400 Weak transcription Left Ventricle heart
37 chr4:143301800-143303000 Enhancers NHEK skin
38 chr4:143301800-143304800 Weak transcription HSMMtube muscle
39 chr4:143301800-143309600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr4:143302200-143304200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr4:143302200-143304400 Weak transcription HMEC breast
42 chr4:143302200-143304600 Weak transcription NHDF-Ad bronchial
43 chr4:143302200-143315000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr4:143302200-143316400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr4:143302200-143323000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr4:143302400-143304600 Weak transcription Fetal Heart heart
47 chr4:143302400-143304600 Weak transcription NHLF lung
48 chr4:143302400-143305200 Genic enhancers Primary T helper cells PMA-I stimulated --
49 chr4:143302400-143305600 Weak transcription A549 lung
50 chr4:143302600-143304400 Weak transcription HSMM muscle

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Last update: Aug 31, 2015