Variant report

Variant	rs1565324
Chromosome Location	chr2:10978185-10978186
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1623958	0.80[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1686472	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1686478	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1686481	0.86[ASN][1000 genomes]
rs1734370	0.80[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1734390	0.84[CHB][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734391	0.89[CHB][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734392	0.80[CEU][hapmap];0.84[CHB][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:10972200-10978800	Enhancers	Fetal Brain Male	brain
2	chr2:10973000-10980200	Weak transcription	Right Atrium	heart
3	chr2:10975400-10978400	Active TSS	Brain Anterior Caudate	brain
4	chr2:10976800-10979200	Enhancers	Fetal Brain Female	brain
5	chr2:10977000-10979400	Enhancers	Brain Germinal Matrix	brain
6	chr2:10977200-10978200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr2:10977200-10978600	Weak transcription	Brain Angular Gyrus	brain
8	chr2:10977400-10978400	Enhancers	Brain Cingulate Gyrus	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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