Variant report

Variant	rs156705
Chromosome Location	chr2:114745110-114745111
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:114737901..114740134-chr2:114744363..114746744,2	K562	blood:
2	chr2:114737041..114739401-chr2:114744363..114746077,2	K562	blood:
3	chr2:114743739..114745544-chr2:114764995..114767366,2	K562	blood:

Variant related genes	Relation type
ENSG00000234199	Chromatin interaction
ENSG00000243179	Chromatin interaction

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10183875	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10197726	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1060906	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs156703	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs156704	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs156709	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs156710	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs156711	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs156712	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs156714	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17269836	0.88[CEU][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs275416	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs276317	0.93[EUR][1000 genomes]
rs276818	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs276820	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs276827	0.94[CEU][hapmap];1.00[CHB][hapmap];0.90[EUR][1000 genomes]
rs418603	0.85[EUR][1000 genomes]
rs467954	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4849289	0.91[JPT][hapmap]
rs4849290	0.90[JPT][hapmap]
rs55701938	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs55748015	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6542187	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6705036	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72837203	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114734000-114746000	Weak transcription	Aorta	Aorta
2	chr2:114734000-114751800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr2:114734400-114749800	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr2:114736200-114761000	Weak transcription	HSMMtube	muscle
5	chr2:114737400-114746000	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr2:114737600-114751400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr2:114737800-114754400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr2:114738000-114748800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr2:114738600-114749400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr2:114739600-114752600	Weak transcription	NH-A	brain
11	chr2:114740600-114745200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr2:114741200-114761000	Weak transcription	HSMM	muscle
13	chr2:114742200-114746200	Enhancers	HepG2	liver
14	chr2:114743000-114751000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr2:114743800-114745600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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