Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10183875	0.89[EUR][1000 genomes]
rs10197726	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1060906	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs156703	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs156704	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs156705	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs156709	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs156710	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs156711	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs156712	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs156714	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17269836	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs275416	0.94[EUR][1000 genomes]
rs276317	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs276818	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs276827	0.89[EUR][1000 genomes]
rs418603	0.84[EUR][1000 genomes]
rs467954	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55701938	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55748015	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6542187	0.93[EUR][1000 genomes]
rs6705036	0.93[EUR][1000 genomes]
rs72837203	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874904	chr2:114751691-115605062	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114736200-114761000	Weak transcription	HSMMtube	muscle
2	chr2:114737800-114754400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr2:114741200-114761000	Weak transcription	HSMM	muscle
4	chr2:114753000-114754000	Weak transcription	HepG2	liver

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