Variant report
Variant | rs418603 |
---|---|
Chromosome Location | chr2:114788849-114788850 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:114780402..114782926-chr2:114788012..114789725,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10183875 | 0.94[CEU][hapmap];0.82[CHB][hapmap];0.80[EUR][1000 genomes] |
rs10197726 | 0.85[EUR][1000 genomes] |
rs1060906 | 0.94[CEU][hapmap] |
rs156703 | 0.85[EUR][1000 genomes] |
rs156704 | 0.86[EUR][1000 genomes] |
rs156705 | 0.95[CEU][hapmap];0.82[CHB][hapmap];0.85[EUR][1000 genomes] |
rs156709 | 0.87[EUR][1000 genomes] |
rs156710 | 0.87[EUR][1000 genomes] |
rs156711 | 0.87[EUR][1000 genomes] |
rs156712 | 0.87[EUR][1000 genomes] |
rs156714 | 0.87[EUR][1000 genomes] |
rs17269836 | 0.82[CEU][hapmap] |
rs275416 | 0.84[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs276317 | 0.83[EUR][1000 genomes] |
rs276818 | 0.84[EUR][1000 genomes] |
rs276820 | 0.84[EUR][1000 genomes] |
rs276827 | 1.00[CEU][hapmap];0.82[CHB][hapmap];0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs467954 | 0.87[EUR][1000 genomes] |
rs55701938 | 0.82[EUR][1000 genomes] |
rs55748015 | 0.82[EUR][1000 genomes] |
rs6542187 | 0.84[EUR][1000 genomes] |
rs6705036 | 0.84[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv874904 | chr2:114751691-115605062 | Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:114788800-114789800 | Enhancers | Fetal Kidney | kidney |