Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:39720733..39723031-chr14:39734245..39737381,4	K562	blood:
2	chr14:39720805..39723353-chr14:39735805..39738506,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10137623	0.80[CHB][hapmap]
rs10140832	0.95[ASN][1000 genomes]
rs12433610	0.90[ASW][hapmap]
rs17109030	0.82[JPT][hapmap]
rs17621388	0.82[JPT][hapmap]
rs17692639	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1980609	0.90[ASW][hapmap]
rs28449389	0.81[EUR][1000 genomes]
rs34843498	0.87[JPT][hapmap]
rs35280646	0.81[ASN][1000 genomes]
rs443158	0.81[EUR][1000 genomes]
rs4902459	0.80[ASW][hapmap]
rs6571912	0.80[ASW][hapmap]
rs7140766	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7143942	0.90[ASW][hapmap];0.88[JPT][hapmap]
rs715136	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7153074	0.80[ASW][hapmap]
rs7154632	0.80[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MKK][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7155164	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8006182	0.90[ASW][hapmap];0.82[JPT][hapmap]
rs8014839	0.92[CEU][hapmap];0.89[JPT][hapmap]
rs8015094	0.92[CEU][hapmap];0.89[JPT][hapmap]
rs8017896	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1053133	chr14:39657535-39770729	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39703600-39735400	Weak transcription	Pancreas	Pancrea
2	chr14:39704400-39734400	Weak transcription	Duodenum Mucosa	Duodenum
3	chr14:39716800-39721400	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr14:39717200-39721200	Weak transcription	Fetal Intestine Large	intestine
5	chr14:39717200-39721600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr14:39718600-39728000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:39719400-39721600	Weak transcription	Liver	Liver
8	chr14:39719800-39721200	Weak transcription	Fetal Intestine Small	intestine
9	chr14:39720800-39721200	Enhancers	HepG2	liver

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